Author: David A Wilkinson; Lea Joffrin; Camille Lebarbenchon; Patrick Mavingui
Title: Partial RdRp sequences offer a robust method for Coronavirus subgenus classification Document date: 2020_3_6
ID: jjraqr85_10
Snippet: Cross-validation: 138 The assignment of sequences to the relevant subgenus using best hit and pairwise identity data from 139 blastn (25) was tested by iteratively removing each sequence from the test database and re-140 assigning its classification. Sequences that could not be re-assigned to the same subgenus by this 141 method were re-classified as "atypical" members of their respective subgenera. 142 R package for assignment of user-generated .....
Document: Cross-validation: 138 The assignment of sequences to the relevant subgenus using best hit and pairwise identity data from 139 blastn (25) was tested by iteratively removing each sequence from the test database and re-140 assigning its classification. Sequences that could not be re-assigned to the same subgenus by this 141 method were re-classified as "atypical" members of their respective subgenera. 142 R package for assignment of user-generated sequences:
Search related documents:
Co phrase search for related documents, hyperlinks ordered by date