Author: Sang Woo Park; Kaiyuan Sun; Cécile Viboud; Bryan T Grenfell; Jonathan Dushoff
Title: Potential roles of social distancing in mitigating the spread of coronavirus disease 2019 (COVID-19) in South Korea Document date: 2020_3_30
ID: 7t3ci8tl_36
Snippet: We then estimated time-dependent backward onset-to-confirmation delay distributions from the partial line list: Given a cohort of infected individuals who were confirmed on the same day, what is the probability distribution of the onset-to-confirmation delay? The backward delay distribution depends on changes in the number of symptomatic cases -e.g., when the number of symptomatic cases are increasing, the backward delay distribution is likely to.....
Document: We then estimated time-dependent backward onset-to-confirmation delay distributions from the partial line list: Given a cohort of infected individuals who were confirmed on the same day, what is the probability distribution of the onset-to-confirmation delay? The backward delay distribution depends on changes in the number of symptomatic cases -e.g., when the number of symptomatic cases are increasing, the backward delay distribution is likely to be shorter because individuals are more likely to have developed symptoms recently. The backward delay distribution was inferred using a negative-binomial regression with loglink using the brms package [22] . Time-dependent mean of the negative binomial distribution is modeled using splines. We assumed weakly informative priors on the fixed effects: normal distributions with mean of 0 and standard deviation of 2; note that these distributions are priors on link scale.
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