Selected article for: "biological sequence and sequence length"

Author: Marie Hoffmann; Michael T. Monaghan; Knut Reinert
Title: PriSeT: Efficient De Novo Primer Discovery
  • Document date: 2020_4_7
  • ID: 3b3hv53b_13
    Snippet: Definition k-mer. With k-mer we refer to a sub-sequence of length k as part of a biological text T . A sequence of length n contains n − k + 1 k-mers. For an arbitrary alphabet Σ, there exist |Σ| k different k-mers, i.e. for DNA 4 k unique k-mers. Since DNA is inherently structured, we do not expect k-mers to be uniformly distributed......
    Document: Definition k-mer. With k-mer we refer to a sub-sequence of length k as part of a biological text T . A sequence of length n contains n − k + 1 k-mers. For an arbitrary alphabet Σ, there exist |Σ| k different k-mers, i.e. for DNA 4 k unique k-mers. Since DNA is inherently structured, we do not expect k-mers to be uniformly distributed.

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