Selected article for: "generation sequencing and Sanger sequencing"

Author: Chen, Yang; Wang, Jie; Wang, Chan; Chen, Shiping; Feng, Nyu; Liu, Haifang; Tang, Xiaoyan; Zhang, Shufang
Title: [A case with α-thalassemia caused by novel start codon variant in conjunct with right deletion variant of α2-globin gene].
  • Cord-id: osy989ub
  • Document date: 2021_1_10
  • ID: osy989ub
    Snippet: OBJECTIVE The explore the genetic basis for a patient with microcytic hypochromic anemia and iron deficiency anemia. METHODS Common deletions and variants of the globin genes were detected by Gap-PCR and next generation sequencing (NGS). Suspected mutations were verified by Sanger sequencing. RESULTS Gap-PCR and NGS showed that the proband has carried a αα/-α 3.7 deletion and a heterozygous c.2T>A (p.Met1Lys) mutation in the initiation codon of the HBA2 gene. The patient and her father both c
    Document: OBJECTIVE The explore the genetic basis for a patient with microcytic hypochromic anemia and iron deficiency anemia. METHODS Common deletions and variants of the globin genes were detected by Gap-PCR and next generation sequencing (NGS). Suspected mutations were verified by Sanger sequencing. RESULTS Gap-PCR and NGS showed that the proband has carried a αα/-α 3.7 deletion and a heterozygous c.2T>A (p.Met1Lys) mutation in the initiation codon of the HBA2 gene. The patient and her father both carried α HBA2 c.2T>A(p.Met1Lys) α/-α 3.7, while her mother and other family members were -α3.7/-α3.7 and αα/-α 3.7, respectively. CONCLUSION Patients with α HBA2 c.2T>A(p.Met1Lys) α/-α 3.7 genotype have typical features of thalassemia and abnormal hematologic indices compared with those with αα/-α3.7 genotype, suggesting that the HBA2 c.2T>A (p.Met1Lys) is a pathogenic variant. Above finding has enriched the spectrum of α-thalassemia mutations and enabled genetic counseling and prenatal diagnosis for the family.

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