Author: Lifeng Zhou; Arun Richard Chandrasekaran; Jibin Abraham Punnoose; Gaston Bonenfant; Stephon Charles; Oksana Levchenko; Pheonah Badu; Cassandra Cavaliere; Cara T. Pager; Ken Halvorsen
Title: Programmable low-cost DNA-based platform for viral RNA detection Document date: 2020_1_16
ID: 8kced06y_29
Snippet: Detection of viral RNA from total RNA First, 500 ng total RNA extracted from uninfected/infected cells was fragmented at 94°C for 9 minutes in 1x fragmentation buffer. Fragmented total RNA was then mixed with nanoswitches (1 nM), MgCl 2 (10 mM) and PBS (1×), and the mixture was made up to 10 µl with nuclease-free water. Samples were then incubated in a thermal annealing ramp from 40 °C to 25 °C at 1 °C min −1 . After the incubation, sampl.....
Document: Detection of viral RNA from total RNA First, 500 ng total RNA extracted from uninfected/infected cells was fragmented at 94°C for 9 minutes in 1x fragmentation buffer. Fragmented total RNA was then mixed with nanoswitches (1 nM), MgCl 2 (10 mM) and PBS (1×), and the mixture was made up to 10 µl with nuclease-free water. Samples were then incubated in a thermal annealing ramp from 40 °C to 25 °C at 1 °C min −1 . After the incubation, samples were stained with GelRed (Biotium Inc.) at 3.3× concentration and incubated at room temperature for 30 min. Before loading the gel, 2 µl of 6x blue loading dye was mixed with each sample, and 10 µl sample was loaded to each well. Samples were run in a 0.8% agarose gel at 65-75 V for about 70-90 minutes in the cold room.
Search related documents:
Co phrase search for related documents- µl mixture 10 and nuclease free water: 1
- µl mixture 10 and room temperature: 1, 2, 3
- agarose gel and blue loading dye: 1, 2
- agarose gel and cold room: 1
- agarose gel and loading dye: 1, 2, 3
- agarose gel and mixture 10: 1
- agarose gel and nuclease free water: 1, 2, 3
- agarose gel and room temperature: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10
- blue loading dye and cold room: 1
- blue loading dye and loading dye: 1, 2, 3, 4
- blue loading dye and room temperature: 1, 2, 3
- cold room and loading dye: 1
- cold room and mixture 10: 1
- cold room and room temperature: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12
- fragmentation buffer and nuclease free water: 1
- loading dye and room temperature: 1, 2, 3, 4
- mixture 10 and nuclease free water: 1
- mixture 10 and room temperature: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12
- nuclease free water and sample mix: 1
Co phrase search for related documents, hyperlinks ordered by date