Selected article for: "genome database and NCBI database"

Author: François Ferron; Humberto Julio Debat; Etienne Decroly; Bruno Canard
Title: Identification of a Nidovirales Orf1a N7-guanine cap Methyltransferase signature-sequence as a genetic marker of large genome Tobaniviridae
  • Document date: 2019_5_17
  • ID: lnf2mj29_9
    Snippet: Virus genome sequences were retrieved from the NCBI database (https://www.ncbi.nlm.nih.gov/genomes/GenomesGroup.cgi?taxid=439488) or Genbank (ncbi.nlm.nih.gov/genbank). The data set (given in Table 1 ) was that of Lauber et al. [21] , to which novel or recently described genome sequences (retrieved in NCBI of GenBank) were added purposely. Additionally, the putative and unpublished Palaemon nidovirus and Western flower thrips nidovirus, and the p.....
    Document: Virus genome sequences were retrieved from the NCBI database (https://www.ncbi.nlm.nih.gov/genomes/GenomesGroup.cgi?taxid=439488) or Genbank (ncbi.nlm.nih.gov/genbank). The data set (given in Table 1 ) was that of Lauber et al. [21] , to which novel or recently described genome sequences (retrieved in NCBI of GenBank) were added purposely. Additionally, the putative and unpublished Palaemon nidovirus and Western flower thrips nidovirus, and the proposed Botrylloides leachii nidovirus [23] , were identified in the Sequence Read Archive (SRA) runs SRR5658389, SRR492945 and SRR2729873, respectively, and the virus sequences were assembled, curated and annotated as described elsewhere [24, 25] . The resulting sequences are available upon request to H.D.

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