Author: Lamia Wahba; Nimit Jain; Andrew Z. Fire; Massa J. Shoura; Karen L. Artiles; Matthew J. McCoy; Dae-Eun Jeong
Title: Identification of a Pangolin Niche for a 2019-nCoV-like Coronavirus via an Extensive Meta-metagenomic Search Document date: 2020_2_14
ID: emr0eh0i_15
Snippet: is relatively low as agreement in those regions is 99. ## This program is a fast metasearch that will look for instances of sequence reads matching ## a reference in at least one k-mer. ## Jazz18Heap is intended to look for evidence of matches to a relatively short reference sequence ## e.g., less than 100KB, but probably workable up to several MB in a large number of high throughput sequencing experiments ## Jazz18Heap is intended for finding re.....
Document: is relatively low as agreement in those regions is 99. ## This program is a fast metasearch that will look for instances of sequence reads matching ## a reference in at least one k-mer. ## Jazz18Heap is intended to look for evidence of matches to a relatively short reference sequence ## e.g., less than 100KB, but probably workable up to several MB in a large number of high throughput sequencing experiments ## Jazz18Heap is intended for finding relatively rare sequence (not common ones) ## Jazz18Heap doesn't substitute for many tools to align and track coverage. It's main goal is rapid identification of potentially homologous sequences ( The copyright holder for this preprint (which was not peer-reviewed) is the . https://doi.org/10.1101/2020.02.08.939660 doi: bioRxiv preprint
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