Author: Andres S. Espindola; William Schneider; Kitty F. Cardwell; Yisel Carrillo; Peter R. Hoyt; Stephen M. Marek; Hassan Melouk; Carla D. Garzon
Title: Inferring the presence of aflatoxin-producing Aspergillus flavus strains using RNA sequencing and electronic probes as a transcriptomic screening tool Document date: 2018_7_9
ID: hdwn2fkj_9
Snippet: In total, 44 genes were identified as up-regulated and 129 genes were down-regulated 205 in the A. flavus genome (Error! Reference source not found. Table) . Identified as part of 206 the aflatoxin gene cluster, only 17 out of 44 upregulated genes. From two to six gene 207 fold changes were plotted in a hierarchical clustering heat map as well as in a MAPlot 208 (Fig 1 Fig 2) . 209 The copyright holder for this preprint (which was not peer-review.....
Document: In total, 44 genes were identified as up-regulated and 129 genes were down-regulated 205 in the A. flavus genome (Error! Reference source not found. Table) . Identified as part of 206 the aflatoxin gene cluster, only 17 out of 44 upregulated genes. From two to six gene 207 fold changes were plotted in a hierarchical clustering heat map as well as in a MAPlot 208 (Fig 1 Fig 2) . 209 The copyright holder for this preprint (which was not peer-reviewed) is the author/funder. It . https://doi.org/10.1101/365254 doi: bioRxiv preprint aflatoxin specifically for AF70. AF36 genome-wide e-probes were not generated 224 because there is not a genome sequence available yet for that specific strain. 225
Search related documents:
Co phrase search for related documents- cluster heat map and heat map: 1, 2, 3
- fold change and gene cluster: 1, 2
- fold change and genome sequence: 1
- fold change and heat map: 1, 2, 3, 4, 5
- fold change and upregulated gene: 1, 2, 3, 4
- gene cluster and genome sequence: 1, 2, 3, 4, 5, 6
- gene cluster and upregulated gene: 1
- genome sequence and specific strain: 1, 2, 3, 4, 5
Co phrase search for related documents, hyperlinks ordered by date