Selected article for: "non structural protein and protein sequence"
Author: Anamika Basu; Anasua Sarkar; Ujjwal Maulik
Title: Strategies for vaccine design for corona virus using Immunoinformatics techniques
  • Document date: 2020_3_2
    • ID: 618glydc_44
    Snippet: Likewise, presence of wider peptide binding groove in MHC II molecule than that of MHC I, 15 mer epitopes are investigated by smm/nn/sturnilo method along with their IC 50 values and are listed in Table 3 . For MHC II binding prediction method, a 15 mer T cell epitope sequence 76 PTDTYTSVYLGKFRG 90 of non-structural protein 4, displays a percentile rank 22.0 with IC 50 value 22.0 at the time of interaction with HLA-DRB5*01:01MHC II allele. This r.....
    Document: Likewise, presence of wider peptide binding groove in MHC II molecule than that of MHC I, 15 mer epitopes are investigated by smm/nn/sturnilo method along with their IC 50 values and are listed in Table 3 . For MHC II binding prediction method, a 15 mer T cell epitope sequence 76 PTDTYTSVYLGKFRG 90 of non-structural protein 4, displays a percentile rank 22.0 with IC 50 value 22.0 at the time of interaction with HLA-DRB5*01:01MHC II allele. This result approves that this peptide can be selected as T cell epitope with MHC II restriction for our protein of interest. Moreover, this T cell epitope sequence is well conserved among the nonstructural protein 4 present in different corona viruses.

    Search related documents:
    Co phrase search for related documents
    • ii allele and MHC MHC II molecule: 1
    • ii allele and non structural protein: 1
    • ii allele and percentile rank: 1, 2, 3, 4
    • interest protein and non structural protein: 1, 2
    • interest protein and nonstructural protein: 1
    • MHC II molecule and non structural protein: 1
    • MHC II molecule and nonstructural protein: 1
    • MHC MHC II molecule and non structural protein: 1
    • MHC MHC II molecule and nonstructural protein: 1
    • non structural protein and nonstructural protein: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
    • non structural protein and percentile rank: 1
    • nonstructural protein and percentile rank: 1, 2