Selected article for: "CoCoPUTs database and codon pair"
Author: Jacob Kames; David Dillon Holcomb; Ofer Kimchi; Michael DiCuccio; Nobuko Hamasaki-Katagiri; Tony Wang; Anton A Komar; Aikaterini Alexaki; Chava Kimchi-Sarfaty
Title: Sequence analysis of SARS-CoV-2 genome reveals features important for vaccine design
  • Document date: 2020_3_31
    • ID: 2fn25l6m_36
    Snippet: RSCU was calculated as defined in Sharp et al. [31] based on Homo sapiens genomic codon usage data accessed from the CoCoPUTs database [5] on March 13, 2020. Codon pair scores (CPS) for all 4096 codon pairs were calculated as described in Coleman et al [2] using Homo sapiens genomic codon pair usage data accessed from the CoCoPUTs database [5] on March 13, 2020. Codon pair bias (CPB) of a gene is the arithmetic mean of all CPSs throughout the gen.....
    Document: RSCU was calculated as defined in Sharp et al. [31] based on Homo sapiens genomic codon usage data accessed from the CoCoPUTs database [5] on March 13, 2020. Codon pair scores (CPS) for all 4096 codon pairs were calculated as described in Coleman et al [2] using Homo sapiens genomic codon pair usage data accessed from the CoCoPUTs database [5] on March 13, 2020. Codon pair bias (CPB) of a gene is the arithmetic mean of all CPSs throughout the gene, as defined in Coleman et al [2] .

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