Author: Nelly Mostajo Berrospi; Marie Lataretu; Sebastian Krautwurst; Florian Mock; Daniel Desirò; Kevin Lamkiewicz; Maximilian Collatz; Andreas Schoen; Friedemann Weber; Manja Marz; Martin Hölzer
Title: A comprehensive annotation and differential expression analysis of short and long non-coding RNAs in 16 bat genomes Document date: 2019_8_19
ID: ihqvcxv6_36
Snippet: For the annotation of tRNAs we applied tRNAscan-SE 53 (v1.3.1) to the bat contigs using default parameters. The results were filtered by removing any tRNAs of type "Undet" or "Pseudo" and the tabular output was transformed into the GTF file format. Additional information about the anticodon and the coverage score were added to the description column. We provide the raw tRNAscan-SE files in Tab. S4......
Document: For the annotation of tRNAs we applied tRNAscan-SE 53 (v1.3.1) to the bat contigs using default parameters. The results were filtered by removing any tRNAs of type "Undet" or "Pseudo" and the tabular output was transformed into the GTF file format. Additional information about the anticodon and the coverage score were added to the description column. We provide the raw tRNAscan-SE files in Tab. S4.
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