Author: Xavier Hernandez-Alias; Martin Schaefer; Luis Serrano
Title: Translational adaptation of human viruses to the tissues they infect Document date: 2020_4_7
ID: 0rk2dw4e_36
Snippet: We included in the analysis all human-infecting viruses from the NCBI Viral Genome Browser, downloaded as of August 29, 2019. Additionally, for its interest, we added a posteriori the new SARS-CoV-2 virus. Viral metadata including family, genus, genetic material type and Baltimore category were retrieved either from the ICTV 2018b Master Species List 54 or the ICTV Virus Metadata Resource (talk.ictvonline.org/taxonomy/vmr/). The sequence-based ph.....
Document: We included in the analysis all human-infecting viruses from the NCBI Viral Genome Browser, downloaded as of August 29, 2019. Additionally, for its interest, we added a posteriori the new SARS-CoV-2 virus. Viral metadata including family, genus, genetic material type and Baltimore category were retrieved either from the ICTV 2018b Master Species List 54 or the ICTV Virus Metadata Resource (talk.ictvonline.org/taxonomy/vmr/). The sequence-based phylogenetic information was obtained from Aiewsakun and Simmonds (2018). Tissue and cell type tropism was determined based on the curated database ViralZone 25 , and allocated to each of the six main classes based on the main annotation. Sup. Table 1 contains all human-infecting viruses and their associated metadata.
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