Selected article for: "amino acid and Ramachandran plot"
Author: Jerome R Lon; Yunmeng Bai; Bingxu Zhong; Fuqiang Cai; Hongli Du
Title: Prediction and Evolution of B Cell Epitopes of Surface Protein in SARS-CoV-2
  • Document date: 2020_4_5
    • ID: fmumym1x_33
    Snippet: With the amino acid sequences of the surface protein of SARS-CoV-2 of NC_045512.2 as templates, based on homology modeling method, we predicted the 3D structure through the online server SWISS-MODEL [17] , selected and optimized the optimal structure based on the template identity and GMQE value [17] , the rationality of the structure was evaluated by Ramachandran plot [18] with PDBsum server. The structures were displayed and analyzed by SWISS-p.....
    Document: With the amino acid sequences of the surface protein of SARS-CoV-2 of NC_045512.2 as templates, based on homology modeling method, we predicted the 3D structure through the online server SWISS-MODEL [17] , selected and optimized the optimal structure based on the template identity and GMQE value [17] , the rationality of the structure was evaluated by Ramachandran plot [18] with PDBsum server. The structures were displayed and analyzed by SWISS-pdb Viewer v4.10 [19] .

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