Author: Bishajit Sarkar; Md. Asad Ullah; Fatema Tuz Johora; Masuma Afrin Taniya; Yusha Araf
Title: The Essential Facts of Wuhan Novel Coronavirus Outbreak in China and Epitope-based Vaccine Designing against COVID-19 Document date: 2020_2_11
ID: 7vrm081c_42
Snippet: construct. An amino acid can be encoded by different codons in different organisms, which is known as codon bias. Codon adaptation predicts the best codon for a specific amino acid that . CC-BY 4.0 International license author/funder. It is made available under a The copyright holder for this preprint (which was not peer-reviewed) is the . https://doi.org/10.1101/2020.02.05.935072 doi: bioRxiv preprint should work effectively and efficiently in a.....
Document: construct. An amino acid can be encoded by different codons in different organisms, which is known as codon bias. Codon adaptation predicts the best codon for a specific amino acid that . CC-BY 4.0 International license author/funder. It is made available under a The copyright holder for this preprint (which was not peer-reviewed) is the . https://doi.org/10.1101/2020.02.05.935072 doi: bioRxiv preprint should work effectively and efficiently in a specific organism. The best predicted vaccine was used for codon adaptation by the Java Codon Adaptation Tool or JCat server (http://www.jcat.de/). The server ensures the maximal expression of protein in a target organism. Eukaryotic E. coli strain K12 was selected at the JCat server and rho-independent transcription terminators, prokaryotic ribosome binding sites and SgrA1 and SphI cleavage sites of restriction enzymes, were avoided.
Search related documents:
Co phrase search for related documents- amino acid and bind site: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14
- amino acid and cleavage site: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76
- amino acid and Codon adaptation: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12
- amino acid and codon bias: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40
- amino acid and different codon: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15
- amino acid and Eukaryotic coli: 1
- amino acid and JCat server: 1
- amino acid and maximal expression: 1
- amino acid and restriction enzyme: 1, 2, 3, 4, 5, 6, 7
- amino acid and rho independent transcription terminator: 1
- amino acid and specific amino acid: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74
- amino acid and transcription terminator: 1
- bind site and cleavage site: 1, 2, 3
- cleavage site and different codon: 1
- cleavage site and restriction enzyme: 1
- cleavage site and specific amino acid: 1, 2
- Codon adaptation and different codon: 1, 2, 3, 4, 5, 6
- Codon adaptation and JCat server: 1
- Codon adaptation and rho independent transcription terminator: 1
Co phrase search for related documents, hyperlinks ordered by date