Author: Natali Ozber; Paolo Margaria; Charles T. Anderson; Massimo Turina; Cristina Rosa
Title: The role of post-Golgi transport pathways and sorting motifs in the plasmodesmal targeting of the movement protein (MP) of Ourmia melon virus (OuMV) Document date: 2019_8_11
ID: bvcahbbi_51
Snippet: The effect of specific amino acid substitutions in MP on virus replication was measured by agroinfiltrating local leaves with pGC-RNA2 (MP) or mutants, together with pGC-RNA1 (RdRP), pGC-RNA3 (CP), and pBin61-GFP at an OD600 of 1.0. The GFP . CC-BY-NC-ND 4.0 International license is made available under a The copyright holder for this preprint (which was not peer-reviewed) is the author/funder. It . https://doi.org/10.1101/724716 doi: bioRxiv pre.....
Document: The effect of specific amino acid substitutions in MP on virus replication was measured by agroinfiltrating local leaves with pGC-RNA2 (MP) or mutants, together with pGC-RNA1 (RdRP), pGC-RNA3 (CP), and pBin61-GFP at an OD600 of 1.0. The GFP . CC-BY-NC-ND 4.0 International license is made available under a The copyright holder for this preprint (which was not peer-reviewed) is the author/funder. It . https://doi.org/10.1101/724716 doi: bioRxiv preprint signal at the infiltrated sites was monitored at 36 hpi to confirm that agroinfiltrated areas were saturated. Two leaf spots from 3 leaves were pooled for each sample at 24 hpi and 48 hpi. The virus accumulation was measured by quantifying RNA1 by qPCR using primers listed in Table S1 . The qPCR was performed in duplicates using iTaq™ Universal SYBR® Green Supermix (BioRad) and a CFX96 (BioRad), following the manufacturer's instructions. The 2 -ΔΔCT method was used to asses fold changes in replication of wild-type and mutants. The data was normalized first using 18S ribosomal RNA, and then a wild-type control at 24 hpi showing the lowest expression. Four plants were used for qPCR analysis. Statistical analysis was performed using ANOVA.
Search related documents:
Co phrase search for related documents- amino acid and fold change: 1, 2, 3, 4
- amino acid and International license: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65
- amino acid and leaf spot: 1
- amino acid and low expression: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10
- amino acid and mutant wild type: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42
- amino acid and mutant wild type replication: 1, 2
- amino acid and qPCR analysis: 1, 2, 3, 4
- amino acid and statistical analysis: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24
- amino acid and Table S1 list: 1
- amino acid and virus accumulation: 1, 2
- amino acid and virus replication: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74
- amino acid and wild type: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75
- amino acid and wild type control: 1, 2, 3
- amino acid substitution and cc NC ND International license: 1, 2, 3
- amino acid substitution and International license: 1, 2, 3, 4
- amino acid substitution and low expression: 1
- amino acid substitution and mutant wild type: 1, 2, 3, 4, 5, 6, 7
- amino acid substitution and mutant wild type replication: 1, 2
- amino acid substitution and statistical analysis: 1
Co phrase search for related documents, hyperlinks ordered by date