Author: Jiao Chen; Jiayu Shang; Jianrong Wang; Yanni Sun
Title: A binning tool to reconstruct viral haplotypes from assembled contigs Document date: 2019_7_16
ID: 2basllfv_35
Snippet: We evaluate the haplotype number estimation and clustering performance of VirBin on both simulated and mock HIV quasispecies sequencing data. The simulated data provide us with known ground-truth for accurate evaluation of the clustering performance. We produced simulated quasispecies sequencing data consisting of 5 haplotypes and 10 haplotypes, respectively......
Document: We evaluate the haplotype number estimation and clustering performance of VirBin on both simulated and mock HIV quasispecies sequencing data. The simulated data provide us with known ground-truth for accurate evaluation of the clustering performance. We produced simulated quasispecies sequencing data consisting of 5 haplotypes and 10 haplotypes, respectively.
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