Selected article for: "maximum likelihood and multiple sequence"
Author: Miyssa I. Abdelmageed; Abdelrahman H. Abdelmoneim; Mujahed I. Mustafa; Nafisa M. Elfadol; Naseem S. Murshed; Shaza W. Shantier; Abdelrafie M. Makhawi
Title: Design of multi epitope-based peptide vaccine against E protein of human COVID-19: An immunoinformatics approach
  • Document date: 2020_2_11
    • ID: 6ojmmmuj_51
    Snippet: As phylogenetic analysis is very powerful tool for determining the evolutionary relationship between strains. Multiple sequence alignment (MSA) was performed using ClustalW for the seven strains of coronavirus, which are COVID-19(NC_04551), SARS-CoV (FJ211859), MESA-CoV (NC_019843), HCoV-HKU1 (AY884001), HCoV-OC43 (KF923903), HCoV-NL63 (NC_005831) and HCoV-229E (KY983587). The maximum likelihood phylogenetic tree revealed that COVID-19 is found i.....
    Document: As phylogenetic analysis is very powerful tool for determining the evolutionary relationship between strains. Multiple sequence alignment (MSA) was performed using ClustalW for the seven strains of coronavirus, which are COVID-19(NC_04551), SARS-CoV (FJ211859), MESA-CoV (NC_019843), HCoV-HKU1 (AY884001), HCoV-OC43 (KF923903), HCoV-NL63 (NC_005831) and HCoV-229E (KY983587). The maximum likelihood phylogenetic tree revealed that COVID-19 is found in the same clade of SARS-CoV, thus the two strains are highly related to each other (Fig. 4) .

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