Author: Niccolo Alfano; Anisha Dayaram; Jan Axtner; Kyriakos Tsangaras; Marie-Louise Kampmann; Azlan Mohamed; Seth Timothy Wong; M. Thomas P. Gilbert; Andreas Wilting; Alex Daivd Greenwood
Title: Non-invasive surveys of mammalian viruses using environmental DNA Document date: 2020_3_29
ID: nil1vv6h_33
Snippet: The targeted sequence capture panel was designed based on the oligonucleotide probes represented on the Virochip microarray [34] . The Virochip is a pan-viral DNA microarray comprising the most highly conserved 70 mer sequences from every fully sequenced reference viral genome present in GenBank, which was developed for the rapid identification and characterization of novel viruses and emerging infectious disease. We retrieved the viral oligonucl.....
Document: The targeted sequence capture panel was designed based on the oligonucleotide probes represented on the Virochip microarray [34] . The Virochip is a pan-viral DNA microarray comprising the most highly conserved 70 mer sequences from every fully sequenced reference viral genome present in GenBank, which was developed for the rapid identification and characterization of novel viruses and emerging infectious disease. We retrieved the viral oligonucleotides from the 5th generation Virochip (Viro5) [35] , which are publicly available at NCBI's Gene Expression Omnibus (GEO) repository [36] , accession number GPL13323 https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL13323 (
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