Author: Niccolo Alfano; Anisha Dayaram; Jan Axtner; Kyriakos Tsangaras; Marie-Louise Kampmann; Azlan Mohamed; Seth Timothy Wong; M. Thomas P. Gilbert; Andreas Wilting; Alex Daivd Greenwood
Title: Non-invasive surveys of mammalian viruses using environmental DNA Document date: 2020_3_29
ID: nil1vv6h_9
Snippet: Retroviridae contigs similar to the simian and feline foamy virus (Spumaretrovirinae subfamily, 79-82% identity) were detected in three samples (L7, L46, L64) (Suppl. Tab. 1). Phylogenetically the contigs clustered together as a sister group to the feline foamy viruses (Felispumavirus genus), potentially being a new genus within the Spumaretrovirinae (Suppl. Fig. 9 ). The contigs mapped to the polymerase gene, which the exogenous retrovirus baits.....
Document: Retroviridae contigs similar to the simian and feline foamy virus (Spumaretrovirinae subfamily, 79-82% identity) were detected in three samples (L7, L46, L64) (Suppl. Tab. 1). Phylogenetically the contigs clustered together as a sister group to the feline foamy viruses (Felispumavirus genus), potentially being a new genus within the Spumaretrovirinae (Suppl. Fig. 9 ). The contigs mapped to the polymerase gene, which the exogenous retrovirus baits were designed to target (Suppl. Fig. 7D ).
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