Selected article for: "contig genome coverage and genome coverage"
Author: Jessica E. Manning; Jennifer A. Bohl; Sreyngim Lay; Sophana Chea; Ly Sovann; Yi Sengdoeurn; Seng Heng; Chan Vuthy; Katrina Kalantar; Vida Ahyong; Michelle Tan; Jonathan Sheu; Cristina M. Tato; Joseph L. DeRisi; Laurence Baril; Veasna Duong; Philippe Dussart; Erik A. Karlsson
Title: Rapid metagenomic characterization of a case of imported COVID-19 in Cambodia
  • Document date: 2020_3_5
    • ID: fu3cl7lq_9
    Snippet: Using the target enrichment strategy, the overall fold enrichment was 6.4x. In terms of improving genome coverage, particularly at the 5' end of the SARS-CoV-2 genome, the resulting 3,077 reads mapping to SARS-CoV-2 assembled into a single contig which provided full coverage of the reference genome at an average depth of 14.9x ( Figure 1C )(NCBI accession MN988668.1)......
    Document: Using the target enrichment strategy, the overall fold enrichment was 6.4x. In terms of improving genome coverage, particularly at the 5' end of the SARS-CoV-2 genome, the resulting 3,077 reads mapping to SARS-CoV-2 assembled into a single contig which provided full coverage of the reference genome at an average depth of 14.9x ( Figure 1C )(NCBI accession MN988668.1).

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