Selected article for: "Ribo seq and RNA seq"
Author: Hazel Stewart; Katherine Brown; Adam M. Dinan; Nerea Irigoyen; Eric J. Snijder; Andrew E. Firth
Title: The transcriptional and translational landscape of equine torovirus
  • Document date: 2018_4_7
    • ID: mozfm5ds_17
    Snippet: To calculate the length distributions of host-and virus-mapped RPFs, we used reads 185 mapping within coding regions. After adaptor trimming, the majority (75 %) of Ribo-186 seq reads were 27 -29 nt in length, which is consistent with the expected size of 187 mammalian ribosome footprints. As expected, the distribution of read lengths for 188 RNA-seq was much broader, peaking between 60 and 70 nt (Supplementary Figure 189 1 ). For quality cont.....
    Document: To calculate the length distributions of host-and virus-mapped RPFs, we used reads 185 mapping within coding regions. After adaptor trimming, the majority (75 %) of Ribo-186 seq reads were 27 -29 nt in length, which is consistent with the expected size of 187 mammalian ribosome footprints. As expected, the distribution of read lengths for 188 RNA-seq was much broader, peaking between 60 and 70 nt (Supplementary Figure 189 1 ). For quality control, histograms of the 5' end positions of host mRNA Ribo-seq and 190

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