Author: Ye, Fuqiang; Han, Yifang; Zhu, Juanjuan; Li, Peng; Zhang, Qi; Lin, Yanfeng; Wang, Taiwu; Lv, Heng; Wang, Changjun; Wang, Chunhui; Zhang, Jinhai
Title: First Identification of Human Adenovirus Subtype 21a in China With MinION and Illumina Sequencers Document date: 2020_4_7
ID: 18b2foud_34
Snippet: After a ∼27.5 h run, MinION generated 55,135 reads, among which 35,466 (64.33%) passed quality control (average base quality = 9.8, mean read length = 997.6 bp, total length = 35,382,056 bp). The first read was produced after 6 s upon the initialization of the sequencing. The top five longest reads all had a length >34.1 kb (34,927, 34,775, 34,209, 34,208, and 34,141 bp, respectively) . Preliminary taxonomic analysis revealed that 60.30% (n = 2.....
Document: After a ∼27.5 h run, MinION generated 55,135 reads, among which 35,466 (64.33%) passed quality control (average base quality = 9.8, mean read length = 997.6 bp, total length = 35,382,056 bp). The first read was produced after 6 s upon the initialization of the sequencing. The top five longest reads all had a length >34.1 kb (34,927, 34,775, 34,209, 34,208, and 34,141 bp, respectively) . Preliminary taxonomic analysis revealed that 60.30% (n = 21,387) and 19.32% (n = 6,852) of reads could be aligned to human and viral genomes separately, with 2.61% of reads aligning to bacterial genomes and the rest (17.77%) defined as unclassified sequences.
Search related documents:
Co phrase search for related documents- bacterial genome and quality control: 1
- bacterial genome and read generate: 1
- base quality and long read: 1, 2, 3
- base quality and quality control: 1, 2, 3
- bp total length and total length: 1, 2, 3, 4, 5, 6, 7
- long read and quality control: 1
- long read and read generate: 1, 2, 3, 4, 5, 6, 7, 8
- long read and total length: 1
- quality control and total length: 1, 2
Co phrase search for related documents, hyperlinks ordered by date