Author: Palmer, Duncan S.; Turner, Isaac; Fidler, Sarah; Frater, John; Goedhals, Dominique; Goulder, Philip; Huang, Kuan-Hsiang Gary; Oxenius, Annette; Phillips, Rodney; Shapiro, Roger; Vuuren, Cloete van; McLean, Angela R.; McVean, Gil
Title: Mapping the drivers of within-host pathogen evolution using massive data sets Document date: 2019_7_9
ID: 100r7w2n_36
Snippet: Selection parameters ω i . We only use a single type of MCMC move to alter ω i across the codon sequence: changing ω i at a given site i. We assume an exponential prior with parameter λ ω for ω i . Following the existing model [4] , a new value ω i is chosen such that ω i = ω i exp(U ), where U ∼ Uniform(−1, 1) and the acceptance probability is.....
Document: Selection parameters ω i . We only use a single type of MCMC move to alter ω i across the codon sequence: changing ω i at a given site i. We assume an exponential prior with parameter λ ω for ω i . Following the existing model [4] , a new value ω i is chosen such that ω i = ω i exp(U ), where U ∼ Uniform(−1, 1) and the acceptance probability is
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