Author: Lau, Susanna K. P.; Wong, Antonio C. P.; Lau, Terrence C. K.; Woo, Patrick C. Y.
Title: Molecular Evolution of MERS Coronavirus: Dromedaries as a Recent Intermediate Host or Long-Time Animal Reservoir? Document date: 2017_10_16
ID: 1sq2uvur_13
Snippet: For the 15 MERS-CoV genomes that showed different clustering in the ORF1ab and S phylogenetic trees, they were subject to recombination analysis. Among these 15 strains, bootscan analysis revealed possible recombination sites in five ( Figure 5A ,B). These five strains were all from dromedaries in Saudi Arabia. They were separated into two groups, with one group containing four strains from Jeddah of almost identical sequences (accession Nos. KT3.....
Document: For the 15 MERS-CoV genomes that showed different clustering in the ORF1ab and S phylogenetic trees, they were subject to recombination analysis. Among these 15 strains, bootscan analysis revealed possible recombination sites in five ( Figure 5A ,B). These five strains were all from dromedaries in Saudi Arabia. They were separated into two groups, with one group containing four strains from Jeddah of almost identical sequences (accession Nos. KT368829, KT368830. KT368831, KT368832) and the remaining one strain from Taif (accession No. KT368887). For the other 10 strains, bootscan analysis did not reveal any obvious pattern that suggested possible recombination ( Figure 5C,D) .
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