Selected article for: "phylogenetic diversity and sample richness"

Author: Holman, Devin B.; Timsit, Edouard; Amat, Samat; Abbott, D. Wade; Buret, Andre G.; Alexander, Trevor W.
Title: The nasopharyngeal microbiota of beef cattle before and after transport to a feedlot
  • Document date: 2017_3_22
  • ID: 1nni3vhm_27
    Snippet: Mycoplasma at day 14. Among the other genera, Bacillus, Streptococcus and Bifidobacterium were notably more relatively abundant at days 0, 2, and 7, respectively. The number of OTUs (richness) and the phylogenetic diversity in each NP sample increased significantly from day 0 to days 2 and 7, however, by day 14, the phylogenetic diversity was similar to day 0 NP samples (Fig. 4) . The evenness (equitability) and diversity (Shannon's index) of the.....
    Document: Mycoplasma at day 14. Among the other genera, Bacillus, Streptococcus and Bifidobacterium were notably more relatively abundant at days 0, 2, and 7, respectively. The number of OTUs (richness) and the phylogenetic diversity in each NP sample increased significantly from day 0 to days 2 and 7, however, by day 14, the phylogenetic diversity was similar to day 0 NP samples (Fig. 4) . The evenness (equitability) and diversity (Shannon's index) of the samples also varied over time, with greater evenness and Shannon diversity at d 2 compared to d 14.

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