Author: Magold, Alexandra I.; Cacquevel, Matthias; Fraering, Patrick C.
Title: Gene Expression Profiling in Cells with Enhanced ?-Secretase Activity Document date: 2009_9_18
ID: 0p8lk12m_40
Snippet: The analysis was performed with open source R software packages (http://www.r-project.org/ and http://www.BioConductor.org/). Gene expression was quantified with the array package using print tip group lowess normalization without background subtraction. The resulting measures of expression for each array are the log2 ratios (M values) and the average log2 intensities (A value) of Cy3 and Cy5 signals. Statistics of differential expression between.....
Document: The analysis was performed with open source R software packages (http://www.r-project.org/ and http://www.BioConductor.org/). Gene expression was quantified with the array package using print tip group lowess normalization without background subtraction. The resulting measures of expression for each array are the log2 ratios (M values) and the average log2 intensities (A value) of Cy3 and Cy5 signals. Statistics of differential expression between the different groups of samples were calculated with a linear model fitted by the limma package.
Search related documents:
Co phrase search for related documents- differential expression and limma package: 1, 2, 3, 4, 5, 6, 7, 8
- differential expression and limma package fit: 1, 2
- differential expression and limma package fit linear model: 1, 2
- gene expression and limma package: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14
- gene expression and limma package fit: 1
- gene expression and limma package fit linear model: 1
- gene expression and linear model: 1, 2, 3, 4, 5, 6, 7, 8, 9
- gene expression and open source: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13
- limma package and linear model: 1, 2, 3, 4
- limma package fit and linear model: 1, 2, 3
- limma package fit linear model and linear model: 1, 2, 3
- linear model and lowess normalization: 1
- linear model and open source: 1, 2, 3, 4
- linear model and print tip: 1, 2
- lowess normalization and print tip: 1
Co phrase search for related documents, hyperlinks ordered by date