Selected article for: "pseudoknot structure and RNA pseudoknot structure"

Author: Gao, James ZM; Li, Linda YM; Reidys, Christian M
Title: Inverse folding of RNA pseudoknot structures
  • Document date: 2010_6_23
  • ID: 1lojd0xa_58
    Snippet: Step II. The competitors. We introduce a specific procedure that "perturbs" arcs of a given RNA pseudoknot structure, S. Let a be an arc of S and let l(a), r(a) denote the start-and end-point of a. A perturbation of a is a procedure which generates a new arc a', such that Clearly, there are nine perturbations of any given arc a (including a itself), see Figure 17 ......
    Document: Step II. The competitors. We introduce a specific procedure that "perturbs" arcs of a given RNA pseudoknot structure, S. Let a be an arc of S and let l(a), r(a) denote the start-and end-point of a. A perturbation of a is a procedure which generates a new arc a', such that Clearly, there are nine perturbations of any given arc a (including a itself), see Figure 17 .

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