Selected article for: "reference genome and target genome"

Author: Tcherepanov, Vasily; Ehlers, Angelika; Upton, Chris
Title: Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome
  • Document date: 2006_6_13
  • ID: 1e2kkhht_32
    Snippet: Although GATU is not a comprehensive genome annotation system such as Pedant [10] or Manatee [11] , GATU significantly reduces the annotation workload by automatically transferring over 90% (depending on the similarity of the reference and target genomes) of the annotations from a reference genome to the target. GATU was designed for use with viral genomes, but as demonstrated here, GATU is also useful for annotation of bacterial genomes. Further.....
    Document: Although GATU is not a comprehensive genome annotation system such as Pedant [10] or Manatee [11] , GATU significantly reduces the annotation workload by automatically transferring over 90% (depending on the similarity of the reference and target genomes) of the annotations from a reference genome to the target. GATU was designed for use with viral genomes, but as demonstrated here, GATU is also useful for annotation of bacterial genomes. Furthermore, GATU offers a variety of builtin tools to assist the user in assigning novel annotations.

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