Selected article for: "amino acid nucleotide distance and phylogenetic tree clustering"

Author: Kolodziejek, Jolanta; Seidel, Bernhard; Jungbauer, Christof; Dimmel, Katharina; Kolodziejek, Michael; Rudolf, Ivo; Hubálek, Zdenek; Allerberger, Franz; Nowotny, Norbert
Title: West Nile Virus Positive Blood Donation and Subsequent Entomological Investigation, Austria, 2014
  • Document date: 2015_5_11
  • ID: 0vm2hhdr_50
    Snippet: The comparison of the entire polyprotein sequences of the Viennese human-and mosquito-derived WNV strains revealed 36 nucleotide (genetic distance 0.003) and five amino acid substitutions (genetic distance 0.001) which were found among the E (A 159 T, T 424 A) and Table 2 . Estimates of evolutionary pairwise distances A. over the Austrian strains (including the SMB 1 plasma isolate) and their nine closest relatives, B. five major groups (clades),.....
    Document: The comparison of the entire polyprotein sequences of the Viennese human-and mosquito-derived WNV strains revealed 36 nucleotide (genetic distance 0.003) and five amino acid substitutions (genetic distance 0.001) which were found among the E (A 159 T, T 424 A) and Table 2 . Estimates of evolutionary pairwise distances A. over the Austrian strains (including the SMB 1 plasma isolate) and their nine closest relatives, B. five major groups (clades), and C. six minor groups (clusters) among clade 2d, all defined according to the clustering in the phylogenetic tree (Fig 1) The average numbers of substitutions per site between nucleotide and amino acid sequences are indicated below and above the diagonal, respectively.

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