Selected article for: "gmqe value and Ramachandran plot"

Author: Sumaira Gulzar; Saqib Hussain
Title: Bioinformatics Study on Structural Protein of Severe Acute Respiratory Syndrome Coronavirus 2 (Sars-Cov-2) For Better Understanding the Vaccine Development
  • Document date: 2020_4_21
  • ID: ien7z5gd_14
    Snippet: The corresponding GMQE value is given as 0 to 1. The QMEAN Z-score gives a global estimation of the "degree of nativeness" of the structural characteristics observed in the model (Benkert et al., 2011) QMEAN Z-scores about zero indicate strong compatibility between the structure of the model and similar-size experimental structures. Scores of -4.0 or below are indicative of poor quality models. The overall stereochemical output was checked by PRO.....
    Document: The corresponding GMQE value is given as 0 to 1. The QMEAN Z-score gives a global estimation of the "degree of nativeness" of the structural characteristics observed in the model (Benkert et al., 2011) QMEAN Z-scores about zero indicate strong compatibility between the structure of the model and similar-size experimental structures. Scores of -4.0 or below are indicative of poor quality models. The overall stereochemical output was checked by PROCHECK (Colovos et al., 1993) including torsional angles to the backbone through the Ramachandran plot

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