Author: Chang, Chia Lin; Semyonov, Jenia; Cheng, Po Jen; Huang, Shang Yu; Park, Jae Il; Tsai, Huai-Jen; Lin, Cheng-Yung; Grützner, Frank; Soong, Yung Kuei; Cai, James J.; Hsu, Sheau Yu Teddy
Title: Widespread Divergence of the CEACAM/PSG Genes in Vertebrates and Humans Suggests Sensitivity to Selection Document date: 2013_4_16
ID: 1jogs44p_16
Snippet: The chromosome 19 SNPs were analyzed based on NCBI dbSNP Build 129 (http://www.ncbi.nlm.nih.gov/projects/SNP/index. html). We computed the unbiased estimate of the F ST for gene region SNPs in the HapMap II using the SPSmart server [40] . LD plots for CEACAM/PSG gene regions were generated using the HaploView 4.1 [41] . The LD blocks were determined using an r2 threshold of 0.8. Analysis of CNVs was performed using the International HapMap Projec.....
Document: The chromosome 19 SNPs were analyzed based on NCBI dbSNP Build 129 (http://www.ncbi.nlm.nih.gov/projects/SNP/index. html). We computed the unbiased estimate of the F ST for gene region SNPs in the HapMap II using the SPSmart server [40] . LD plots for CEACAM/PSG gene regions were generated using the HaploView 4.1 [41] . The LD blocks were determined using an r2 threshold of 0.8. Analysis of CNVs was performed using the International HapMap Project server (http://hapmap.ncbi.nlm.nih.gov/index.html.en) and manual search of individual publications.
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