Author: Kaliamurthi, Satyavani; Selvaraj, Gurudeeban; Kaushik, Aman Chandra; Gu, Ke-Ren; Wei, Dong-Qing
Title: Designing of CD8(+) and CD8(+)-overlapped CD4(+) epitope vaccine by targeting late and early proteins of human papillomavirus Document date: 2018_10_2
ID: j0runrkf_17
Snippet: Epitopes conservancy analysis tools were used to find out the degree of conservancy of an epitope within a set of given protein sequences at a given identity level. 49 A set of sequences of epitopes (e) and proteins {p} were given as input. The degree of conservation percentage of e within p was estimated as the fraction of {p} that matched the aligned e above a chosen identity level. The conservancy analysis was performed for structural and nons.....
Document: Epitopes conservancy analysis tools were used to find out the degree of conservancy of an epitope within a set of given protein sequences at a given identity level. 49 A set of sequences of epitopes (e) and proteins {p} were given as input. The degree of conservation percentage of e within p was estimated as the fraction of {p} that matched the aligned e above a chosen identity level. The conservancy analysis was performed for structural and nonstructural protein sequences of 15 hrHPV strains (HPV16, 18, 31, 33, 35, 39, 51, 52, 56, 58, 59, 68, 69, 73, and 82) .
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