Selected article for: "accession number and gene symbol"
Author: Noh, Heeju; Shoemaker, Jason E; Gunawan, Rudiyanto
Title: Network perturbation analysis of gene transcriptional profiles reveals protein targets and mechanism of action of drugs and influenza A viral infection
  • Document date: 2018_4_6
    • ID: j80hnhpb_9
    Snippet: The raw data from the chromosome-targeting study using mouse pancreatic alpha and beta cells (26) were also obtained from GEO database (accession number: GSE36379). Again, the raw data were normalized using justRMA, and the log 2 FCs and their adjusted P-values were calculated by limma. The probes were mapped to the corresponding gene symbols using moe430a.db package (Entrez Gene database as of 27 September 2015) in Bioconductor. In the case of m.....
    Document: The raw data from the chromosome-targeting study using mouse pancreatic alpha and beta cells (26) were also obtained from GEO database (accession number: GSE36379). Again, the raw data were normalized using justRMA, and the log 2 FCs and their adjusted P-values were calculated by limma. The probes were mapped to the corresponding gene symbols using moe430a.db package (Entrez Gene database as of 27 September 2015) in Bioconductor. In the case of multiple probe sets mapping to a gene symbol, we selected the probe set with the smallest average adjusted P-value among the samples.

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