Author: Karthi Balasubramanian; Nithin Nagaraj
Title: Automatic Identification of SARS Coronavirus using Compression-Complexity Measures Document date: 2020_3_27
ID: ljli6a2z_55
Snippet: Genome Abbreviation Length 1 AY278741 SARS-CoV-1: Urbani Urbani 29727 2 AY278488 SARS-CoV-1: BJ01 BJ01 29725 3 NC_004718.3 SARS-CoV-2: Reference Sequence SARS-CoV-2 29751 Table 5 : Pairwise mean distances for the three viruses -SARS-CoV-2, BJ01 and Urbani. We have averaged across 300 short contiguous segments of length 25 nucleotide bases each. These 300 segments were chosen independently at random locations of the entire genome. The .....
Document: Genome Abbreviation Length 1 AY278741 SARS-CoV-1: Urbani Urbani 29727 2 AY278488 SARS-CoV-1: BJ01 BJ01 29725 3 NC_004718.3 SARS-CoV-2: Reference Sequence SARS-CoV-2 29751 Table 5 : Pairwise mean distances for the three viruses -SARS-CoV-2, BJ01 and Urbani. We have averaged across 300 short contiguous segments of length 25 nucleotide bases each. These 300 segments were chosen independently at random locations of the entire genome. The mean distance between the two SARS-CoV-1 viruses BJ01 and Urbani is the least for both LZ and ETC measures. This result is statistically significant only for the ETC based measure.
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