Selected article for: "gene ontology and high confidence"
Author: Zhang, Kunlin; Cui, Sijia; Chang, Suhua; Zhang, Liuyan; Wang, Jing
Title: i-GSEA4GWAS: a web server for identification of pathways/gene sets associated with traits by applying an improved gene set enrichment analysis to genome-wide association study
  • Document date: 2010_7_1
    • ID: jjfcuybb_11
    Snippet: The collection of pathways/gene sets utilized in i-GSEA4GWAS are extracted and curated from MSigDB v2.5 (http://www.broadinstitute.org/gsea /msigdb/) (15) to ensure comprehensiveness and high quality. It includes gene sets denoting canonical pathways integrated from a variety of online resources like KEGG (19) and BioCarta (http://www.biocarta .com/), and GO (gene ontology) terms with high confidence (20) . Additionally, i-GSEA4GWAS supports cust.....
    Document: The collection of pathways/gene sets utilized in i-GSEA4GWAS are extracted and curated from MSigDB v2.5 (http://www.broadinstitute.org/gsea /msigdb/) (15) to ensure comprehensiveness and high quality. It includes gene sets denoting canonical pathways integrated from a variety of online resources like KEGG (19) and BioCarta (http://www.biocarta .com/), and GO (gene ontology) terms with high confidence (20) . Additionally, i-GSEA4GWAS supports customized gene sets, i.e. users can upload their own gene sets. This provides the opportunity that the knowledge database (gene sets) can always be expanded, and makes it easy for users to test their hypothesis within their research interest.

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